--- fancygene ---


Protocol:local User:
Machine:localhost CVSROOT:/data/FC/cvs

Filename: fancygene.pl
Revision 1.53drambald 2009/06/04 10:19:28 +18 -3
Oval shape for UTRs
Show difference between Revision 1.52 and 1.53
Revision 1.52drambald 2009/06/03 13:19:05 +2 -4
Unscaled genes
Show difference between Revision 1.51 and 1.52
Revision 1.51drambald 2009/06/03 11:31:13 +66 -51
CSS and interface modified
Show difference between Revision 1.50 and 1.51
Revision 1.50drambald 2009/05/28 15:04:28 +70 -10
Fixed slow re-draw bug: was a regression intriduced with image size on output page
Show difference between Revision 1.49 and 1.50
Revision 1.49drambald 2009/05/28 09:50:25 +10 -1
Review Bioinformatics paper: new shapes in testing
Show difference between Revision 1.48 and 1.49
Revision 1.48drambald 2009/05/26 16:53:35 +21 -5
End of history and fixed BACK. BUG with XML::Simple slow down re-draw
Show difference between Revision 1.47 and 1.48
Revision 1.47drambald 2009/05/26 12:42:02 +190 -2
History table: step 1
Revision 1.46drambald 2009/05/21 14:13:53 +90 -1
Legend options
Revision 1.45drambald 2009/05/21 09:50:09 +6 -5
Moved options to the right
Revision 1.44drambald 2009/05/19 12:33:35 +22 -8
Data inside the XML file
Revision 1.43drambald 2009/05/18 15:20:48 +44 -44
XML refactoring step II
Revision 1.42drambald 2009/05/14 10:38:08 +1 -2
Fixed bug in lof file link
Revision 1.41drambald 2009/05/13 16:36:44 +32 -21
Major Revision Refactoring Iteration 1
Revision 1.40drambald 2009/05/13 15:32:46 +15 -9
Fixed BUG in the simple format and autolocus
Revision 1.39drambald 2009/02/06 14:30:13 +16 -5
Change in Load and fancygene.pl to handle a locus label parameter
Revision 1.38drambald 2009/02/06 11:21:43 +12 -5
Big change in Load, Data and fancygene.pl to handle locus LABEL in GFF, GTF and remote mode
Revision 1.37drambald 2009/01/30 15:46:55 +0 -1
Implemented the locus label (if not general locus): may be this have generated some bugs. Need testing...
Revision 1.36drambald 2009/01/27 12:34:59 +5 -2
Modified header in result page
Revision 1.35drambald 2009/01/22 14:07:49 +135 -60
More changes in the graphical interface and pasing of parameters
Revision 1.34drambald 2009/01/22 10:25:39 +404 -251
Big changes in the graphical interface and pasing of parameters
Revision 1.33drambald 2008/11/28 12:30:07 +2 -19
small modification at the update objects field
Revision 1.32drambald 2008/11/14 15:23:25 +78 -6
Sortable list of object (ajax based on mootools), still some probems with visualization of buttons. Must find a workaround or change strategy
Revision 1.31drambald 2008/11/13 10:16:25 +11 -4
upgrade to javascript code in order to improve IE compatibility
Revision 1.30drambald 2008/11/07 13:25:40 +4 -3
Changed the appereance of result interface
Revision 1.29drambald 2008/11/05 16:25:35 +6 -6
small changes to the interface
Revision 1.28drambald 2008/11/05 15:03:25 +36 -6
XML file to store configuration and config save as XML file (to restore user config), must update HELP
Revision 1.27drambald 2008/09/17 16:31:59 +6 -5
Resolved a BUG fancygene.pl and Load.pm (SMART domains parsing)
Revision 1.26drambald 2008/09/17 15:49:19 +5 -1
Resolved a BUG fancygene.pl (order, data now are getted from the fancyobject)
Revision 1.25drambald 2008/09/17 15:10:51 +2 -1
Resolved a BUG in PDF file dimension when there are too much objects
Revision 1.24drambald 2008/09/01 10:53:32 +3 -2
Gene Refseq wixard 2.0, with name2 expansion
Revision 1.23drambald 2008/09/01 09:36:00 +28 -14

Last update before crash of the server
Revision 1.22drambald 2008/07/21 14:25:43 +39 -4
The WIZARD backbone
Revision 1.21drambald 2008/07/18 09:45:06 +45 -36
Working on interface, strand under the gene label, some BUG (FC bugs) resolved
Revision 1.20drambald 2008/07/09 14:24:14 +28 -25
making standard xhtml page
Revision 1.19drambald 2008/07/07 09:53:36 +50 -32
Legend
Revision 1.18drambald 2008/07/03 13:36:49 +3 -3
Strand arrow in exon or utr
Revision 1.17drambald 2008/07/02 15:40:40 +93 -39
Interface: level 2 - all is ok remain: check user input
Revision 1.16drambald 2008/07/01 14:02:42 +618 -200
Interface and options
Revision 1.15drambald 2008/06/27 09:46:06 +70 -23
Domains END of development part 2
Revision 1.14drambald 2008/06/26 09:51:14 +91 -13
Domains part 2
Revision 1.13drambald 2008/06/18 16:48:48 +50 -16
Domain: multiplication by 3, problems in OUTPUT (multiplication 2 times)
Revision 1.12drambald 2008/06/13 16:31:22 +162 -58
Interface Building, CGI side
Revision 1.11drambald 2008/06/11 16:13:17 +16 -21
Domains! Code started
Revision 1.10drambald 2008/06/09 13:29:30 +57 -23

No TAINT mode with DBM::Deep (Insecure dependency using -T switch)
Revision 1.9drambald 2008/05/20 16:43:39 +43 -7
Version 1.0 restored: a BUG in markers, now only one word markers are allowed. Next is start work on the HTML and javascript part
Revision 1.8drambald 2008/05/19 17:13:45 +1 -1
Working on Paint: paint gene and labels, remain to fix some BUGS into the overlapping check for labels
Revision 1.7drambald 2008/05/18 12:52:18 +17 -12
Big Update: start Paint.pm, locus and ticksmarks are OK, next is draw gene
Revision 1.6drambald 2008/05/13 17:01:01 +30 -7
Scale.pm start: locus scale
Revision 1.5drambald 2008/05/13 14:28:11 +59 -29
End of data loading, method write_data to write data to the temporary file
Revision 1.4drambald 2008/04/29 15:50:34 +31 -12
Data.pm: handle data and checks, multiple locus and manual locus OK, next TODO intron autodraw
Revision 1.3drambald 2008/04/29 11:27:16 +4 -1
Implemented GFF and GTF loader: next step is load parameters
Revision 1.2drambald 2008/04/24 16:51:48 +5 -4
working on the Load.pm system TODO: gff and gtf loader
Revision 1.1drambald 2008/04/23 17:04:56 None
Initial revision
Revision 1.1.1.1drambald 2008/04/23 17:04:56 +0 -0
initial import into cvs
Show difference between Revision 1.1 and 1.1.1.1


File made using version 1.1 of cvs2html by drambald at 2009-06-04 10:20 and only showing the 6 latest version differences